无法让 cgal 和 hdf5 协同工作

Can't make cgal and hdf5 work together

本文关键字:hdf5 协同工作 cgal      更新时间:2023-10-16

我正在使用这些步骤(第二行源代码)。然而,我读/写扩展名为.h5的文件,其中的代码肯定需要这个标志:-lhdf5

为了编译hdf5的函数,我会做这样的事情:

g++ -std=c++0x main.cpp -lhdf5

请注意,标志必须放置在编译命令的末尾,如本答案所述。

由于有评论,我更新了我的问题。

所以,我修改了CMakeLists.txt,我更改的是这一部分:

add_definitions(${CMAKE_CXX_FLAGS} "-std=c++0x")
set(CMAKE_EXE_LINKER_FLAGS "-lhdf5 -lhdf5_hl -lhdf5_cpp")

然而,当我执行make时,似乎没有找到hdf5。


编辑

在马克的建议下,我得到了:

Linking CXX executable exe
/usr/bin/cmake -E cmake_link_script CMakeFiles/exe.dir/link.txt --verbose=1
/usr/bin/c++    -frounding-math -O3 -DNDEBUG  -lhdf5 -lhdf5_hl -lhdf5_cpp CMakeFiles/exe.dir/match.cpp.o  -o exe -rdynamic -L/home/samaras/code/CGAL-4.3/lib -L/usr/local/lib -lmpfr -lgmp /home/samaras/code/CGAL-4.3/lib/libCGAL.so -lboost_thread-mt -lpthread /usr/local/lib/libboost_system.so /home/samaras/code/CGAL-4.3/lib/libCGAL.so -lboost_thread-mt -lpthread /usr/local/lib/libboost_system.so -Wl,-rpath,/home/samaras/code/CGAL-4.3/lib:/usr/local/lib

我想问题就在这里(也可以看到我联系的答案)hdf5的链接器标志不在末尾

最后该怎么说?也许我用错了set()


EDIT-解决方案

以下是正在运行的CMakeLists.txt:

# Created by the script cgal_create_cmake_script_with_options
# This is the CMake script for compiling a set of CGAL applications.
project( exe )

cmake_minimum_required(VERSION 2.6.2)
if("${CMAKE_MAJOR_VERSION}.${CMAKE_MINOR_VERSION}" VERSION_GREATER 2.6)
  if("${CMAKE_MAJOR_VERSION}.${CMAKE_MINOR_VERSION}.${CMAKE_PATCH_VERSION}" VERSION_GREATER 2.8.3)
    cmake_policy(VERSION 2.8.4)
  else()
    cmake_policy(VERSION 2.6)
  endif()
endif()
set( CMAKE_ALLOW_LOOSE_LOOP_CONSTRUCTS true )
if ( COMMAND cmake_policy )
  cmake_policy( SET CMP0003 NEW )  
endif()
# CGAL and its components
add_definitions(${CMAKE_CXX_FLAGS} "-std=c++0x")
find_package( CGAL QUIET COMPONENTS  )
if ( NOT CGAL_FOUND )
  message(STATUS "This project requires the CGAL library, and will not be compiled.")
  return()  
endif()
# include helper file
include( ${CGAL_USE_FILE} )
find_package            (CGAL)
include                 (${CGAL_USE_FILE})
add_definitions         (${CGAL_CXX_FLAGS_INIT})
include_directories     (${CGAL_INCLUDE_DIRS})
set                     (libraries ${libraries} ${CGAL_LIBRARY} ${CGAL_3RD_PARTY_LIBRARIES})
set                     (CMAKE_EXE_LINKER_FLAGS "-dynamic ${CMAKE_EXE_LINKER_FLAGS}")
find_package                (HDF5 QUIET COMPONENTS CXX)
if                          (HDF5_FOUND)
  include_directories       (SYSTEM ${HDF5_CXX_INCLUDE_DIR})
  set (HDF5_libraries ${HDF5_hdf5_LIBRARY} ${HDF5_hdf5_cpp_LIBRARY})
  set                       (HDF5_libraries     hdf5 hdf5_cpp)
endif                       (HDF5_FOUND)

# Boost and its components
find_package( Boost REQUIRED )
if ( NOT Boost_FOUND )
  message(STATUS "This project requires the Boost library, and will not be compiled.")
  return()  
endif()
# include for local directory
# include for local package

# Creating entries for target: exe
# ############################
add_executable( exe  match.cpp )
add_to_cached_list( CGAL_EXECUTABLE_TARGETS exe )
# Link the executable to CGAL and third-party libraries
target_link_libraries(exe   ${CGAL_LIBRARIES} ${CGAL_3RD_PARTY_LIBRARIES} ${libraries} ${HDF5_libraries})

我一起使用CGAL和HDF5。这是我的CMakeLists.txt:中的相关部分

find_package                (HDF5 QUIET COMPONENTS CXX)
if                          (HDF5_FOUND)
  include_directories       (SYSTEM ${HDF5_CXX_INCLUDE_DIR})
  add_library               (hdf5 STATIC IMPORTED)
  set_target_properties     (hdf5 PROPERTIES IMPORTED_LOCATION ${HDF5_hdf5_LIBRARY})
  add_library               (hdf5_cpp STATIC IMPORTED)
  set_target_properties     (hdf5_cpp PROPERTIES IMPORTED_LOCATION ${HDF5_hdf5_cpp_LIBRARY})
  set                       (HDF5_libraries     hdf5 hdf5_cpp)
  add_executable            (exe match.cpp)
  target_link_libraries     (exe ${libraries} ${HDF5_libraries})
endif                       (HDF5_FOUND)

在CMakeLists.txt的早期版本中,有:

find_package            (CGAL)
include                 (${CGAL_USE_FILE})
add_definitions         (${CGAL_CXX_FLAGS_INIT})
include_directories     (${CGAL_INCLUDE_DIRS})
set                     (libraries ${libraries} ${CGAL_LIBRARY} ${CGAL_3RD_PARTY_LIBRARIES})
set                     (CMAKE_EXE_LINKER_FLAGS "-dynamic ${CMAKE_EXE_LINKER_FLAGS}")